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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55396175_55424429_R

Intron Information:

Intron Rank:

144759

Intron Class:

major

Intron Phase:

Intron Coordinates:

55396175 - 55424429

Intron Length:

28255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGACGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTTCCTGACGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

69.6

0.44

0.9

34.8

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

60.1

0.4

2.1

84.75

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031103

55387152 - 55425195

38044