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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5541494_5542063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5541494 - 5542063

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

ATTTTGGAAACT

Flanking Amino Acid:

KCNLCYRVNDVPEEFMYNPL

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

62.2

0.3

1.1

68.9

Major PPT

91.1

0.93

0.6

88.3

21.4

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

-0.3

2.7

73.16

44.2

Associated Gene:

Gene:

SEC24B

Ensembl Gene ID:

ENSAPLG00000009250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036095

5513334 - 5556179

42846

ENSAPLT00000018227

5513334 - 5556179

42846

ENSAPLT00000009721

5513334 - 5556179

42846