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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55430889_55437632_R

Intron Information:

Intron Rank:

142708

Intron Class:

major

Intron Phase:

Intron Coordinates:

55430889 - 55437632

Intron Length:

6744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TTTTTACCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGCTTTTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

69.1

41.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.1

0.68

0.7

28.6

Minor 5ss

38.1

-1.3

48.4

41.1

Minor BPS

58.3

0.24

1.6

65.82

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020890

55430763 - 55459105

28343