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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55570128_55611137_R

Intron Information:

Intron Rank:

146094

Intron Class:

major

Intron Phase:

Intron Coordinates:

55570128 - 55611137

Intron Length:

41010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TAGTGATTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.2

38.5

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

76.2

0.59

0.8

68.7

37.2

Minor 5ss

33.7

-1.9

3.1

43.4

44.3

Minor BPS

48.5

-0.1

2.1

62.23

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027604

55561317 - 55611352

50036

ENSAPLT00000017564

55557405 - 55654043

96639