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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5563970_5583331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5563970 - 5583331

Intron Length:

19362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CCTTTCTGAAAC

Flanking Amino Acid:

GGLAPMPAPQQVQLWRQTRT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

77.7

0.62

72.9

42.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

56.7

0.19

1.6

63.83

41.7

Associated Gene:

Gene:

MCUB

Ensembl Gene ID:

ENSAPLG00000010215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010664

5563889 - 5590935

27047