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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55745506_55818692_R

Intron Information:

Intron Rank:

151002

Intron Class:

major

Intron Phase:

Intron Coordinates:

55745506 - 55818692

Intron Length:

73187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

AAGTAATGAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

67.7

0.44

38.9

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

41.9

-0.7

1.9

44.22

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034333

55745117 - 55827376

82260