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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55810115_55832565_F

Intron Information:

Intron Rank:

127383

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55810115 - 55832565

Intron Length:

22451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

AAATTTAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTAAATTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

58.6

0.19

1.1

53.2

44.1

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

56.2

0.19

1.6

67.66

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039594

55809969 - 55833598

23630