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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55844258_55935854_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55844258 - 55935854

Intron Length:

91597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCACATAC

5'SS Class:

major

3'SS Sequence:

ACGGGGAAATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAGGAT

U12 Branch Point Sequence:

TAGTCCGTGAGG

Flanking Amino Acid:

PSTFTDIWEISIGAKIDREQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.4

38.7

Major BPS

47.8

-0.1

1.5

45.5

47.5

Major PPT

47.2

-0.1

1.1

37.7

42.9

Minor 5ss

39.2

-1.2

2.9

50.9

45.7

Minor BPS

46.3

-0.4

2.3

54.95

46.5

Associated Gene:

Gene:

PCDH18

Ensembl Gene ID:

ENSAPLG00000014396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020234

55835503 - 55936495

100993