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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5588726_5589936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5588726 - 5589936

Intron Length:

1211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTTTCTTCACC

Flanking Amino Acid:

FYAYFVLTKQDYLYPDVKDR

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

80.2

0.68

0.8

74.3

35.2

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

68.9

0.58

1.7

77.35

39.1

Associated Gene:

Gene:

MCUB

Ensembl Gene ID:

ENSAPLG00000010215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010664

5563889 - 5590935

27047