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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5593794_5595497_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5593794 - 5595497

Intron Length:

1704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

CTCTCTCCAACA

Flanking Amino Acid:

VGKPKIFIIQACRGDKHDDP

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

74.1

0.54

0.8

69.6

29.7

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

49.6

-0

1.9

63.87

42.8

Associated Gene:

Gene:

CASP6

Ensembl Gene ID:

ENSAPLG00000010415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010862

5592157 - 5600443

8287