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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5598837_5600436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5598837 - 5600436

Intron Length:

1600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTAGG

5'SS Class:

major

3'SS Sequence:

GTTCCAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TCTGTTCCAATT

Flanking Amino Acid:

MSGHVQLDSRST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

63.6

48.1

Major BPS

71.8

0.54

1.2

32.5

Major PPT

74.5

0.55

0.9

38.1

Minor 5ss

33.3

-1.9

2.9

33.2

42.1

Minor BPS

45.4

-0.2

1.9

63.57

41.8

Associated Gene:

Gene:

CASP6

Ensembl Gene ID:

ENSAPLG00000010415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010862

5592157 - 5600443

8287