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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5604140_5605209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5604140 - 5605209

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TCTCACTTAACT

Flanking Amino Acid:

KTLGISESVQACESTVQLLF

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

85.9

0.81

0.9

79.9

37.7

Minor 5ss

-1

3.1

48.4

47.2

Minor BPS

74.2

0.84

1.5

86.76

38.6

Associated Gene:

Gene:

PLA2G12A

Ensembl Gene ID:

ENSAPLG00000010690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043109

5604021 - 5607026

3006

ENSAPLT00000011121

5604021 - 5607026

3006