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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5605376_5606738_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5605376 - 5606738

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGCGAGGC

5'SS Class:

major

3'SS Sequence:

ATTTTCTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CCAACCTTAATT

Flanking Amino Acid:

AAAVPSPPSSFDIGIPSMTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

51.8

39.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

82.6

0.73

0.8

77.2

30.9

Minor 5ss

24.7

-2.9

3.3

32.6

42.5

Minor BPS

68.1

0.65

1.4

73.31

43.8

Associated Gene:

Gene:

PLA2G12A

Ensembl Gene ID:

ENSAPLG00000010690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011121

5604021 - 5607026

3006