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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5611063_5612319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5611063 - 5612319

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGAT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TCATTTTTAACT

Flanking Amino Acid:

CKVSGWGLEKGYTKQYVLKW

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.3

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

-1.5

3.6

55.1

49.2

Minor BPS

76.8

0.92

1.1

83.9

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040999

5609148 - 5623116

13969

ENSAPLT00000011248

5609148 - 5623116

13969