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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5613189_5613844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5613189 - 5613844

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GTTGTTTGAATA

Flanking Amino Acid:

RIVGGEIASKGEFPWQVAIK

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

65.4

0.35

1.1

62.2

43.3

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

0.12

1.5

63.99

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040999

5609148 - 5623116

13969

ENSAPLT00000011248

5609148 - 5623116

13969