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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5614475_5615633_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

5614475 - 5615633

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTCCATT

5'SS Class:

weak_minor

3'SS Sequence:

TATTCCATCACAG|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTCCATCACA

Flanking Amino Acid:

GEDEAQALCSGRTKRVENYS

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

66.5

44.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

76.4

0.59

0.9

69.9

34.9

Minor 5ss

61.6

0.39

2.1

75.9

39.6

Minor BPS

61.5

0.35

77.83

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040999

5609148 - 5623116

13969

ENSAPLT00000011248

5609148 - 5623116

13969