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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56148626_56151549_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
56148626 - 56151549

Intron Length:
2924

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGTCTC

5'SS Class:
strong_major

3'SS Sequence:
TTAACTCTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCGTGAT

U12 Branch Point Sequence:
CTTAGCTTAACT

Flanking Amino Acid:
WTVCGILSLFGALCYAELGT

Intron Amino Acid Position:
93

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
77.9
36.8

Major BPS
68.7
0.46
1.3
59.3
47.1

Major PPT
79.7
0.67
0.9
73
37.1

Minor 5ss
38.9
-1.2
3
50.6
40.1

Minor BPS
68.5
0.66
1.9
84.56
42.1

Associated Gene:

Gene:
SLC7A11

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

56091818 - 56151826
60009

56091818 - 56151826
60009