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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5616994_5619459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5616994 - 5619459

Intron Length:

2466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTGCTTTCATC

Flanking Amino Acid:

VRLQCQKAVRECSADEFTCA

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

73.9

42.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

69.2

0.43

63.6

Minor 5ss

31.5

-2.1

2.4

34.7

Minor BPS

59.8

0.29

1.8

73.34

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011248

5609148 - 5623116

13969