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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5619639_5620040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5619639 - 5620040

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TCTCTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

AATTACAGAACT

Flanking Amino Acid:

NVACRHLDFELGAEYYNTVF

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

73.5

37.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.2

0.77

0.7

79.2

26.3

Minor 5ss

46.4

-0.4

2.8

64.2

41.3

Minor BPS

0.14

1.9

75.48

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011248

5609148 - 5623116

13969

ENSAPLT00000040999

5609148 - 5623116

13969