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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56205026_56242901_R

Intron Information:

Intron Rank:

142707

Intron Class:

major

Intron Phase:

Intron Coordinates:

56205026 - 56242901

Intron Length:

37876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TTTGGTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.2

30.6

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

0.68

0.8

74.8

33.5

Minor 5ss

34.9

-1.7

2.7

40.9

45.4

Minor BPS

50.8

2.1

69.42

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037193

56201387 - 56242961

41575