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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5624011_5624090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5624011 - 5624090

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TGGTTTATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TATTCGAGACCT

Flanking Amino Acid:

YDQGPPETVVLLGEFMHPCE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

73.1

31.9

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

79.7

0.67

0.9

74.1

40.3

Minor 5ss

43.1

-0.8

2.8

58.5

40.5

Minor BPS

43.5

-0.4

2.5

71.21

Associated Gene:

Gene:

GAR1

Ensembl Gene ID:

ENSAPLG00000010926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011370

5623379 - 5773732

150354