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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5625668_5773631_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5625668 - 5773631

Intron Length:

147964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATCC

5'SS Class:

strong_major

3'SS Sequence:

GACAGAGGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAG

U12 Branch Point Sequence:

TTTTCCAGGAGG

Flanking Amino Acid:

GRGGGRGGGRGERVALSLMA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.7

29.4

Major BPS

53.4

0.08

1.7

72.5

43.5

Major PPT

39.1

-0.6

1.6

26.5

35.6

Minor 5ss

33.8

-1.8

42.5

44.5

Minor BPS

48.1

-0.2

2.1

64.62

43.1

Associated Gene:

Gene:

GAR1

Ensembl Gene ID:

ENSAPLG00000010926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011370

5623379 - 5773732

150354