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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56299109_56324996_R

Intron Information:

Intron Rank:

145838

Intron Class:

major

Intron Phase:

Intron Coordinates:

56299109 - 56324996

Intron Length:

25888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCGTTTTTATTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.8

0.51

0.9

69.5

36.8

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

47.3

-0.3

1.6

45.24

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023335

56298981 - 56347628

48648