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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56382764_56382850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56382764 - 56382850

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCACCG

5'SS Class:

major

3'SS Sequence:

TCCTCCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GGCGCCTCACGG

Flanking Amino Acid:

ASTAPPPPRAGCPMGGGGSR

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.2

46.9

43.4

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

74.5

0.55

0.7

73.2

25.1

Minor 5ss

-2.2

3.3

39.5

45.9

Minor BPS

38.6

-1

36.55

45.1

Associated Gene:

Gene:

NOCT

Ensembl Gene ID:

ENSAPLG00000026879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023187

56381391 - 56384078

2688