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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5638926_5639311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5638926 - 5639311

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGGTTC

5'SS Class:

major

3'SS Sequence:

TCTGTCTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TCTGTCTTATCA

Flanking Amino Acid:

TCTVNWRKNDASFVSYTMSV

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.4

64.8

42.3

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

78.7

0.65

0.9

77.9

35.2

Minor 5ss

42.2

-0.9

3.3

54.3

43.5

Minor BPS

60.4

0.32

1.7

70.18

42.7

Associated Gene:

Gene:

RRH

Ensembl Gene ID:

ENSAPLG00000010998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011466

5632649 - 5642746

10098