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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56412849_56413802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56412849 - 56413802

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAG

U12 Branch Point Sequence:

TTTCTTTCTATA

Flanking Amino Acid:

FDSNGIKKEEENEPVSEFPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

78.1

31.1

Major BPS

64.7

0.37

1.5

63.7

43.9

Major PPT

88.1

0.86

0.6

84.5

23.5

Minor 5ss

29.1

-2.4

2.6

31.9

42.1

Minor BPS

47.8

-0.1

1.8

64.02

36.2

Associated Gene:

Gene:

ELF2

Ensembl Gene ID:

ENSAPLG00000014003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014596

56391056 - 56415534

24479