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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56430667_56432753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

56430667 - 56432753

Intron Length:

2087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACAGT

5'SS Class:

major

3'SS Sequence:

TTCTTTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TCCCTCTAAAAC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

66.2

45.1

Major BPS

0.57

73.6

28.6

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

39.4

-1.2

3.3

46.3

Minor BPS

48.2

-0.1

1.8

56.08

42.5

Associated Gene:

Gene:

MGARP

Ensembl Gene ID:

ENSAPLG00000025584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019637

56428857 - 56452391

23535