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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56433665_56445507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56433665 - 56445507

Intron Length:

11843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAATTTA

5'SS Class:

major

3'SS Sequence:

ATTTGATTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCTCTCTGATTT

Flanking Amino Acid:

AANSEAAAAQETVSEVLDVA

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

78.6

31.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

72.2

0.5

0.9

66.1

39.4

Minor 5ss

39.5

-1.2

2.8

50.2

Minor BPS

50.2

0.08

1.7

69.64

41.7

Associated Gene:

Gene:

MGARP

Ensembl Gene ID:

ENSAPLG00000025584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019637

56428857 - 56452391

23535