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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5646367_5653422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5646367 - 5653422

Intron Length:

7056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGTAA

5'SS Class:

major

3'SS Sequence:

TTTCTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAC

U12 Branch Point Sequence:

TTTTTCCCACTC

Flanking Amino Acid:

DVLQTQRVILGLQDNPWFCD

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

64.5

37.9

Major BPS

52.9

0.07

1.1

59.6

32.7

Major PPT

90.7

0.92

0.6

89.3

19.6

Minor 5ss

41.7

-0.9

3.1

49.2

Minor BPS

47.2

-0.2

2.1

66.7

39.3

Associated Gene:

Gene:

LRIT3

Ensembl Gene ID:

ENSAPLG00000030537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042329

5645913 - 5656843

10931