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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56474222_56475111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56474222 - 56475111

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTTTTTTGGTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

NAA15

Ensembl Gene ID:

ENSAPLG00000006263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006545

56474137 - 56499225

25089

ENSAPLT00000014568

56461692 - 56498403

36712