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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56480690_56481069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56480690 - 56481069

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

AATTCTGTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TAAACTGTAAAA

Flanking Amino Acid:

YKGLEKALKPANMMERLKIY

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

75.7

0.58

66.1

44.4

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

47.2

-0.2

2.1

59.59

39.7

Associated Gene:

Gene:

NAA15

Ensembl Gene ID:

ENSAPLG00000006263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006545

56474137 - 56499225

25089

ENSAPLT00000014568

56461692 - 56498403

36712