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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56490519_56492598_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56490519 - 56492598

Intron Length:

2080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTTTCT

5'SS Class:

major

3'SS Sequence:

CCGGAATCTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CTTCCCGGAATC

Flanking Amino Acid:

EELIPEKLAKVEAPLEEAIK

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

70.5

35.9

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

58.9

0.2

50.3

38.1

Minor 5ss

36.4

-1.5

3.1

45.4

Minor BPS

48.6

-0.1

2.1

64.52

41.3

Associated Gene:

Gene:

NAA15

Ensembl Gene ID:

ENSAPLG00000006263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006545

56474137 - 56499225

25089

ENSAPLT00000014568

56461692 - 56498403

36712