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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56512677_56517181_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56512677 - 56517181

Intron Length:

4505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCAGCG

5'SS Class:

major

3'SS Sequence:

CTTCCGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AGTAATAAAACA

Flanking Amino Acid:

AVTIDGERIKIQLWDTAGQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

54.3

43.4

Major BPS

70.8

0.52

70.6

31.6

Major PPT

83.1

0.75

0.8

80.1

31.9

Minor 5ss

34.9

-1.7

3.6

47.8

47.9

Minor BPS

42.1

-0.6

1.9

53.43

38.2

Associated Gene:

Gene:

RAB33B

Ensembl Gene ID:

ENSAPLG00000022797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036988

56512258 - 56518186

5929