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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56530244_56531037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56530244 - 56531037

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCATTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATG

Flanking Amino Acid:

CACYDSVTGMEWLQPNEDQN

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.5

0.57

0.8

70.7

34.3

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

71.7

0.54

1.2

69.97

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021328

56528557 - 56534773

6217

ENSAPLT00000007193

56529895 - 56534101

4207