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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56531185_56532003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56531185 - 56532003

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTGGCTTGAACA

Flanking Amino Acid:

SSHPAHVIRTKFVLSKVVKG

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.2

34.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.9

0.7

84.9

29.9

Minor 5ss

37.5

-1.4

2.7

48.2

40.4

Minor BPS

57.1

0.22

1.6

64.7

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021328

56528557 - 56534773

6217

ENSAPLT00000007193

56529895 - 56534101

4207