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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56532136_56533654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56532136 - 56533654

Intron Length:

1519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

TTTCCTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCTCCTTTAATT

Flanking Amino Acid:

RTRAPVWAGMVNVLIAASII

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

62.2

43.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

84.9

0.78

0.8

80.4

30.5

Minor 5ss

29.1

-2.4

3.3

35.3

42.3

Minor BPS

76.8

0.92

1.1

84.98

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007193

56529895 - 56534101

4207