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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56842869_56842965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56842869 - 56842965

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAACGGCG

5'SS Class:

major

3'SS Sequence:

TGATTTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

GTTGCATTAAAG

Flanking Amino Acid:

RAAGMNAEMDAVEAENQVEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

52.7

44.5

Major BPS

70.2

0.5

71.6

30.1

Major PPT

78.7

0.65

73.1

41.9

Minor 5ss

35.6

-1.6

3.6

48.2

47.5

Minor BPS

-0

1.9

62.96

44.2

Associated Gene:

Gene:

SCOC

Ensembl Gene ID:

ENSAPLG00000023909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038282

56837650 - 56843741

6092