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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56857718_56859025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56857718 - 56859025

Intron Length:

1308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTAGCA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAGAT

U12 Branch Point Sequence:

TTTTTCTTAAAA

Flanking Amino Acid:

APMIDNPNYQGIWSPRKIPN

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

61.8

Major BPS

62.6

0.31

58.7

38.1

Major PPT

76.4

0.59

79.8

31.2

Minor 5ss

29.7

-2.3

3.4

40.1

45.4

Minor BPS

82.2

1.01

1.2

88.42

27.9

Associated Gene:

Gene:

CLGN

Ensembl Gene ID:

ENSAPLG00000007372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007664

56848827 - 56872201

23375