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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5686424_5687379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5686424 - 5687379

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACATAT

U12 Branch Point Sequence:

TGCTTGTTTACA

Flanking Amino Acid:

RIHLTGAKQERLCYIDKGIS

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

66.4

0.41

61.3

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

47.8

-0.1

2.3

63.2

Associated Gene:

Gene:

EGF

Ensembl Gene ID:

ENSAPLG00000011867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038561

5673983 - 5730610

56628

ENSAPLT00000012395

5673983 - 5730610

56628