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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56886467_56890122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56886467 - 56890122

Intron Length:

3656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTAAATAAAAT

Flanking Amino Acid:

VKVCNPEKDAAHCEKEKAKI

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

46.4

-0.1

2.2

72.71

43.2

Associated Gene:

Gene:

MGAT4D

Ensembl Gene ID:

ENSAPLG00000007550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007871

56881574 - 56916152

34579