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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56897004_56899016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56897004 - 56899016

Intron Length:

2013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TCTCACTAAACT

Flanking Amino Acid:

VNSVAESVKSSFPKEIQSGV

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.3

1.07

0.7

84.4

33.5

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

87.9

0.85

0.7

83.3

25.1

Minor 5ss

36.9

-1.5

51.2

45.2

Minor BPS

58.9

0.36

1.9

78.43

43.5

Associated Gene:

Gene:

MGAT4D

Ensembl Gene ID:

ENSAPLG00000007550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007871

56881574 - 56916152

34579