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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56899064_56901237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56899064 - 56901237

Intron Length:

2174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

GTGACTTGAAAA

Flanking Amino Acid:

DCVIIIFVAEVNEEYVNSVA

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

65.8

0.39

57.3

39.4

Major PPT

88.7

0.87

0.6

88.9

20.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

49.8

-0

1.6

59.32

39.9

Associated Gene:

Gene:

MGAT4D

Ensembl Gene ID:

ENSAPLG00000007550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007871

56881574 - 56916152

34579