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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56906266_56916061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56906266 - 56916061

Intron Length:

9796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCTCTGAAAA

Flanking Amino Acid:

LWYAAWPGGTDNDLAMYRSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.5

0.69

0.9

74.2

35.2

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

55.9

0.18

1.6

66.83

39.1

Associated Gene:

Gene:

MGAT4D

Ensembl Gene ID:

ENSAPLG00000007550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007871

56881574 - 56916152

34579