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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5690820_5691805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5690820 - 5691805

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

GCCATCTCATGT

Flanking Amino Acid:

GAVHLLQSSGRHQLLGMSLF

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.3

29.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

81.1

0.7

0.8

76.8

31.9

Minor 5ss

41.2

-1

45.5

Minor BPS

39.8

-0.7

1.9

48.69

44.4

Associated Gene:

Gene:

EGF

Ensembl Gene ID:

ENSAPLG00000011867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038561

5673983 - 5730610

56628

ENSAPLT00000012395

5673983 - 5730610

56628