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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56921963_56922947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56921963 - 56922947

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTAACTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

ACTATGTTAACT

Flanking Amino Acid:

EHSLGSSKNKVLRNALHVDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

31.4

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

69.5

0.44

0.9

66.3

40.3

Minor 5ss

32.2

-2

3.5

47.2

48.2

Minor BPS

55.5

0.25

2.1

74.39

42.6

Associated Gene:

Gene:

ELMOD2

Ensembl Gene ID:

ENSAPLG00000008211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008550

56921326 - 56927605

6280