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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56923943_56924901_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
56923943 - 56924901

Intron Length:
959

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAAACA

5'SS Class:
strong_major

3'SS Sequence:
CATATTTGTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATGCAT

U12 Branch Point Sequence:
TATGCATGACAT

Flanking Amino Acid:
NEEHEEQLIELWNLLMPHEN

Intron Amino Acid Position:
134

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.7
0.77
0.9
76.8
31.6

Major BPS
67.2
0.43
1.4
77.7
37.1

Major PPT
74.3
0.55
1
69
41.4

Minor 5ss
33.1
-1.9
2.9
41.4
44.7

Minor BPS
43.8
-0.3
2.1
64.84
44.7

Associated Gene:

Gene:
ELMOD2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

56921326 - 56927605
6280