Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_56938417_56939067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56938417 - 56939067

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCATC

5'SS Class:

major

3'SS Sequence:

TCTCCCCACCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

CTCTCCCCACCT

Flanking Amino Acid:

FEDITPECTHVVGLDSRNKQ

Intron Amino Acid Position:

966

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

68.8

42.2

Major BPS

71.2

0.53

37.5

Major PPT

66.4

0.37

0.8

58.8

31.8

Minor 5ss

42.7

-0.8

3.2

56.9

42.2

Minor BPS

46.8

-0.1

2.2

68.62

47.8

Associated Gene:

Gene:

TBC1D9

Ensembl Gene ID:

ENSAPLG00000008419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008843

56937051 - 56985930

48880