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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56939155_56940130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56939155 - 56940130

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGATATTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAAAT

Flanking Amino Acid:

KLLYKMHVLPDPSPEQEEPD

Intron Amino Acid Position:

937

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.1

0.41

66.2

44.7

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

53.6

0.19

81.24

39.2

Associated Gene:

Gene:

TBC1D9

Ensembl Gene ID:

ENSAPLG00000008419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008843

56937051 - 56985930

48880