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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56949026_56949638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56949026 - 56949638

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGAATCTTAATT

Flanking Amino Acid:

DDGEAMTVLGRYLDSVTNKD

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

85.9

29.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.3

0.77

0.8

78.9

34.4

Minor 5ss

47.1

-0.3

2.7

68.3

42.6

Minor BPS

69.7

0.7

1.2

78.21

37.9

Associated Gene:

Gene:

TBC1D9

Ensembl Gene ID:

ENSAPLG00000008419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008843

56937051 - 56985930

48880