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Intron Name: Anas_platyrhynchos_platyrhynchos_4_56962554_56964123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56962554 - 56964123

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGTA

5'SS Class:

major

3'SS Sequence:

CGCTGCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

AGCACCTAACAT

Flanking Amino Acid:

INTFVRGKIQGIIAEYNKIN

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

72.4

39.5

Major BPS

58.7

0.22

1.2

Major PPT

67.9

0.4

0.9

38.5

Minor 5ss

40.4

-1.1

3.5

57.6

47.1

Minor BPS

43.6

-0.4

57.03

45.1

Associated Gene:

Gene:

TBC1D9

Ensembl Gene ID:

ENSAPLG00000008419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008843

56937051 - 56985930

48880